Returns the default cache directory with a version number
Source:R/utils.R
get_default_cache_dir.RdReturns the default cache directory with a version number
References
Mangiola, S., M. Milton, N. Ranathunga, C. S. N. Li-Wai-Suen, A. Odainic, E. Yang, W. Hutchison et al. "A multi-organ map of the human immune system across age, sex and ethnicity." bioRxiv (2023): 2023-06. doi:10.1101/2023.06.08.542671.
Examples
get_metadata(cloud_metadata = SAMPLE_DATABASE_URL, cache_directory = get_default_cache_dir())
#> # Source: SQL [?? x 76]
#> # Database: DuckDB 1.5.2 [unknown@Linux 6.17.0-1010-azure:R 4.6.0/:memory:]
#> cell_id observation_joinid dataset_id sample_id sample_ experiment___
#> <dbl> <chr> <chr> <chr> <chr> <chr>
#> 1 14 qxl7HJjL$L 842c6f5d-4a94-4ee… 1119f482… 1119f4… ""
#> 2 15 TjgA2vJ1;{ 842c6f5d-4a94-4ee… 1119f482… 1119f4… ""
#> 3 16 j}0<Y>a#X~ 842c6f5d-4a94-4ee… 1119f482… 1119f4… ""
#> 4 17 QRMCN*8*|# 842c6f5d-4a94-4ee… 1119f482… 1119f4… ""
#> 5 18 h22!#$}SJ* 842c6f5d-4a94-4ee… 1119f482… 1119f4… ""
#> 6 19 lNmuO5xs~3 842c6f5d-4a94-4ee… 1119f482… 1119f4… ""
#> 7 20 6Eu5c&aEH; 842c6f5d-4a94-4ee… 1119f482… 1119f4… ""
#> 8 5 N>_|{;6_6N 842c6f5d-4a94-4ee… 1f755b9b… 1f755b… ""
#> 9 2 $jvBt8wHSK 842c6f5d-4a94-4ee… 1f755b9b… 1f755b… ""
#> 10 3 5jp7Uu{#@# 842c6f5d-4a94-4ee… 1f755b9b… 1f755b… ""
#> # ℹ more rows
#> # ℹ 70 more variables: run_from_cell_id <chr>, sample_heuristic <chr>,
#> # age_days <int>, tissue_groups <chr>, nFeature_expressed_in_sample <int>,
#> # nCount_RNA <dbl>, empty_droplet <lgl>, cell_type_unified_ensemble <chr>,
#> # is_immune <lgl>, subsets_Mito_percent <int>, subsets_Ribo_percent <int>,
#> # high_mitochondrion <lgl>, high_ribosome <lgl>, scDblFinder.class <chr>,
#> # sample_chunk <int>, cell_chunk <int>, sample_pseudobulk_chunk <int>, …